CryoEM Database
Useful Cryo-EM Links

Reconstruction Packages:
EMAN - Software for single particle analysis and electron micrograph analysis.
IMAGIC - Environment for the analysis of images, spectra and other multi-dimensional data-sets.
Frealign - An alignment program for single-particle reconstruction.
Situs - Software for the modeling of atomic resolution structures into low-resolution density maps.
SPIDER - System for processing image data in electron microscopy and related fields
Suprim - Software for the processing of transmission electron micrographs.

Volumetric Data Visualization:
Chimera - An interactive molecular graphics program.
DINO - A realtime 3D visualization program for structural biology data.
O - A macromolecular crystallographic modeling tool.
PyMOL - A python-enhanced molecular graphics program.
AUTO3DEM(including RobEM) - Imaging program using the Purdue Image Format (.PIF).
Vis5d+ - An OpenGL-based volumetric visualization program.
Vision - A visual network-based programming environment for visualization of data.
VMD - Visualization using built-in scripting.
Web - A graphical user interface for displaying and interacting with SPIDER images.

Other Related Links:
NRAMM - National Resource for Automated Molecular Microscopy
3DEM - A 3-dimensional electron microscopy mailing list.
EMYP - Electron Microscopy yellowpages

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