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Hetero Groups in Virus Structures

Virus Name Family T-number RNA/DNA Water Ions Other Groups Resolution
Satellite Tobacco Mosaic Virus (1a34) Satellites 11 (RNA)
1 (RNA)
1 (RNA)
168
1 SO42-
-1.81 Å
Poliovirus (Type 1, Mahoney Strain) Mutant V1160I (1al2) Picornaviridae pT3-534
-1 SPH
1 MYR
2.90 Å
Bacteriophage MS2 Mutant (T59S)/RNA Operator (1aq3) Leviviridae 32 (RNA)
216
--2.80 Å
Bacteriophage MS2 Mutant (T45A)/RNA Operator (1aq4) Leviviridae 32 (RNA)
214
--3.00 Å
Poliovirus (Type 1, Mahoney Strain) Mutant V1160I, P1095S (1ar6) Picornaviridae pT3-541
-1 SPH
1 MYR
2.90 Å
Poliovirus (Type 1, Mahoney Strain) Mutant P1095S, H2142Y (1ar7) Picornaviridae pT3-543
-1 SPH
1 MYR
2.90 Å
Poliovirus (Type 1, Mahoney Strain) Mutant P1095S (1ar8) Picornaviridae pT3-503
-1 SPH
1 MYR
2.90 Å
Poliovirus (Type 1, Mahoney Strain) Mutant H2142Y (1ar9) Picornaviridae pT3-535
-1 SPH
1 MYR
2.90 Å
Poliovirus (Type 1, Mahoney Strain) (1asj) Picornaviridae pT3-540
-1 SPH
1 MYR
2.90 Å
Human Rhinovirus 16 (1aym) Picornaviridae pT3-533
1 Zn2+
1 MYR
1 DAO
2.15 Å
Human Rhinovirus 16 (1ayn) Picornaviridae pT3-311
1 Zn2+
1 DAO
1 MYR
2.90 Å
Cricket Paralysis Virus (1b35) Dicistroviridae pT3-178
--2.40 Å
Bovine Enterovirus VG-5-27 (1bev) Picornaviridae pT3-130
2 SO42-
1 MYR
3.00 Å
Bacteriophage MS2, Mutant P78N (1bms) Leviviridae 3-172
--2.70 Å
Canine Panleukopenia Virus (1c8d) Parvoviridae 1--1 Ca2+
-3.00 Å
Feline Panleukopenia Virus (1c8f) Parvoviridae 1--3 Ca2+
-3.00 Å
Feline Panleukopenia Virus (1c8g) Parvoviridae 1--2 Ca2+
-3.00 Å
Canine Parvovirus Strain D (pH 5.5) (1c8h) Parvoviridae 1--2 Ca2+
-3.50 Å
Human Rhinovirus 16/Pleconaril Complex (1c8m) Picornaviridae pT3-482
1 Zn2+
1 W11
2.80 Å
Tobacco Necrosis Virus (TNV) (1c8n) Tombusviridae 3-192
5 Ca2+
-2.25 Å
Coxsackievirus B3 Coat Protein (1cov) Picornaviridae pT3---1 PLM
1 MYR
3.50 Å
Cowpea Chlorotic Mottle Virus (CCMV) (1cwp) Bromoviridae 32 (RNA)
1 (RNA)
---3.20 Å
Coxsackievirus A9 (1d4m) Picornaviridae pT3-448
-2 W71
1 MYR
2.90 Å
Desmodium Yellow Mottle Virus (DYMV) (1ddl) Tymoviridae 31 (RNA)
1 (RNA)
285
--2.70 Å
Bacteriophage MS2/RNA Hairpin (4One-5) (1dzs) Leviviridae 32 (RNA)
156
--2.85 Å
Bacteriophage MS2/RNA Hairpin (5Bru-5) (1e6t) Leviviridae 32 (RNA)
205
-2 BRO
2.20 Å
Bacteriophage MS2/RNA Hairpin (2One-5) (1e7x) Leviviridae 32 (RNA)
179
--2.38 Å
Poliovirus Type2/Sch48973 Complex (1eah) Picornaviridae pT3-271
-1 SC4
1 MYR
2.90 Å
Reovirus Core (1ej6) Reoviridae 1--1 Zn2+
-3.60 Å
Echovirus 1 (FAROUK Strain) (1ev1) Picornaviridae pT3-14
-1 PLM
1 MYR
3.55 Å
Rice Yellow Mottle Virus (1f2n) Sobemoviridae 3-199
3 Ca2+
-2.80 Å
Pariacoto Virus (PAV) (1f8v) Nodaviridae 31 (RNA)
219
1 SO42-
1 Ca2+
-3.00 Å
Human Rhinovirus 2 (1fpn) Picornaviridae pT3-159
-1 DAO
2.60 Å
Bacteriophage MS2/RNA Hairpin (C-7) (1gkv) Leviviridae 32 (RNA)
---3.30 Å
Bacteriophage MS2/RNA Hairpin (G-10) (1gkw) Leviviridae 32 (RNA)
137
--2.56 Å
Bacteriophage MS2/RNA Hairpin (G-5) (1h8j) Leviviridae 32 (RNA)
154
--2.80 Å
Echovirus 11 (Strain 207) (1h8t) Picornaviridae pT3-11
-1 DOA
1 MYR
2.90 Å
Bacteriophage MS2/RNA Hairpin (2Thio-U-5-6) (1hdw) Leviviridae 3-183
--2.60 Å
Bacteriophage MS2/RNA Hairpin (2Thio-U-5) (1he0) Leviviridae 3-174
--2.68 Å
Bacteriophage MS2/RNA Hairpin (Ade-5) (1he6) Leviviridae 32 (RNA)
144
--2.65 Å
Human Rhinovirus 14/Sch38057 Complex (1hri) Picornaviridae pT3---1 S57
3.00 Å
Human Rhinovirus 14/SDZ 35-682 Complex (1hrv) Picornaviridae pT3---1 SDZ
3.00 Å
Poliovirus (Mahoney Strain) (1hxs) Picornaviridae pT3-545
-1 PLM
1 MYR
2.20 Å
Canine Parvovirus Strain D, Mutant A300D (1ijs) Parvoviridae 11 (DNA)
1 (DNA)
---3.25 Å
Brome Mosaic Virus (1js9) Bromoviridae 3--2 Mg2+
6 EGL
3.40 Å
Human Rhinovirus 16/HIV Type 1 V3 Loop Chimera (1k5m) Picornaviridae pT3-637
-1 SPH
2.70 Å
Bacteriophage MS2/RNA Hairpin (C-10) (1kuo) Leviviridae 32 (RNA)
152
--2.70 Å
Tomoto Aspermy Virus (1laj) Bromoviridae 31 (RNA)
-1 PO43-
1 Mg2+
-3.40 Å
Sindbis Virus (1ld4) Togaviridae 4--32 UNKNOWN ATOM OR ION
-MODEL
Bacteriophage α3 (1m06) Microviridae 11 (DNA)
--6 C
3.50 Å
Mengo Encephalomyocarditis Virus (pH 4.6) (1mec) Picornaviridae pT3-296
2 PO43-
-3.20 Å
Swine Vesicular Disease Virus (1mqt) Picornaviridae pT3-30
-1 SPL
3.30 Å
Bacteriophage MS2, Mutant E76D (1mst) Leviviridae 3-220
--2.60 Å
Bacteriophage MS2 Mutant T45A (1mva) Leviviridae 3-223
--3.00 Å
Bacteriophage MS2 Mutant T59S (1mvb) Leviviridae 3-218
--3.00 Å
Mice Minute Virus (MVM), Strain I (1mvm) Parvoviridae 11 (DNA)
1 (DNA)
1 (DNA)
---3.50 Å
Human Rhinovirus 14/Pleconaril Complex (1na1) Picornaviridae pT3-242
-1 W11
3.30 Å
Human Rhinovirus 14/Pleconaril Complex (1ncq) Picornaviridae pT3-242
-1 W11
2.50 Å
Human Rhinovirus 16/Pleconaril Complex (1ncr) Picornaviridae pT3-338
1 Zn2+
1 MYR
1 W11
2.70 Å
Human Rhinovirus 16 (1nd2) Picornaviridae pT3-493
1 Zn2+
2 MYR
2.50 Å
Human Rhinovirus 16/Pleconaril Complex (1nd3) Picornaviridae pT3-466
1 Zn2+
1 W11
2.80 Å
Cocksfoot Mottle Virus (1ng0) Sobemoviridae 3-256
3 Ca2+
-2.70 Å
Poliovirus/Receptor Complex (1nn8) Picornaviridae pT3---1 MYR
MODEL
Cowpea Mosaic Virus (1ny7) Comoviridae pT3-64
--3.00 Å
Nudaurelia Capensis ω Virus (1ohf) Tetraviridae 4-516
4 Mg2+
-2.80 Å
Bacteriophage HK97 Mature Empty Capsid (1ohg) Siphoviridae 7l--1 SO42-
1 Cl-
-3.45 Å
Swine Vesicular Disease Virus (1oop) Picornaviridae pT3---1 MYR
1 SPH
3.00 Å
Carnation Mottle Virus (1opo) Tombusviridae 3--3 SO42-
1 Ca2+
-3.20 Å
Canine Parvovirus (1p5w) Parvoviridae 11 (DNA)
84
4 Mg2+
-3.30 Å
Canine Parvovirus (1p5y) Parvoviridae 1-65
--3.20 Å
Bean Pod Mottle Virus, Middle Component (1pgl) Comoviridae pT31 (RNA)
191
--2.80 Å
Bean Pod Mottle Virus, Top Component (1pgw) Comoviridae pT3-150
--2.90 Å
Poliovirus (Type 3, Sabin Strain)/Win51711 Complex (1piv) Picornaviridae pT3---1 W71
1 MYR
2.90 Å
Poliovirus (Type 1, Mahoney Strain)/R80633 Complex (1po1) Picornaviridae pT3---1 J80
1 MYR
2.90 Å
Poliovirus (Type 1, Mahoney Strain)/R77975 Complex (1po2) Picornaviridae pT3---1 J77
1 MYR
2.90 Å
Poliovirus Type 1 (Mahoney Strain) Empty Capsid (1pov) Picornaviridae pT3-210
-1 SPH
1 MYR
2.88 Å
Poliovirus Type 3 (Sabin Strain) (1pvc) Picornaviridae pT3-423
-1 SPH
1 MYR
2.40 Å
Human Rhinovirus 16/Antiviral C Complex (1qju) Picornaviridae pT3-343
1 Zn2+
1 MYR
1 W01
2.80 Å
Human Rhinovirus 16/Antiviral C Complex (1qjx) Picornaviridae pT3-270
1 Zn2+
1 MYR
1 W02
2.80 Å
Human Rhinovirus 16/Antiviral C Complex (1qjy) Picornaviridae pT3-303
1 Zn2+
1 MYR
1 W03
2.80 Å
Foot and Mouth Disease Virus (1qqp) Picornaviridae pT3-631
--1.90 Å
Human Rhinovirus 14/WinVIII Complex (1r08) Picornaviridae pT3---1 W42
3.00 Å
Human Rhinovirus 14/WinR61837 Complex (1r09) Picornaviridae pT3-198
-1 JEN
1 DMS
2.90 Å
Human Rhinovirus Serotype 1A (1r1a) Picornaviridae pT3---1 SUC
3.20 Å
Φ-X 174 DNA binding protein J (1rb8) Microviridae 11 (DNA)
--6 C
3.50 Å
Human Rhinovirus 3 (1rhi) Picornaviridae pT3--1 Ca2+
-3.00 Å
Human Rhinovirus 14 Mutant C199Y (1rmu) Picornaviridae pT3-261
-1 TRS
3.00 Å
Human Rhinovirus 14 Mutant N1105S/Win52035 Complex (1ruc) Picornaviridae pT3---1 W35
3.10 Å
Human Rhinovirus 14 Mutant N1105S/Win52035 Complex (1rud) Picornaviridae pT3---1 W84
2.90 Å
Human Rhinovirus 14 Mutant N1219A/Win52035 Complex (1rue) Picornaviridae pT3---1 W35
2.90 Å
Human Rhinovirus 14 Mutant N1219S/Win52035 Complex (1rug) Picornaviridae pT3---1 W35
3.00 Å
Human Rhinovirus 14 Mutant N1219S/Win52084 Complex (1ruh) Picornaviridae pT3---1 W84
3.00 Å
Human Rhinovirus Mutant S1223G/Win52084 Complex (1rui) Picornaviridae pT3---1 W84
3.00 Å
Sesbania Mosaic Virus (SMV) (1smv) Sobemoviridae 3--4 Ca2+
-3.00 Å
Satellite Panicum Mosaic Virus (1stm) Satellites 1-328
--1.90 Å
Theiler's Murine Encephalomyelitis Virus (DA Strain) (1tme) Picornaviridae pT3-327
--2.80 Å
Human Rhinovirus 2/Receptor Fragment Complex (1v9u) Picornaviridae pT3--1 Ca2+
1 DAO
3.60 Å
Poliovirus (Type 3, Sabin Strain)/R78206 Complex (1vba) Picornaviridae pT3---1 J78
1 MYR
2.90 Å
Poliovirus (Type3, Sabin Strain)/R80633 Complex (1vbb) Picornaviridae pT3---1 J80
1 MYR
2.80 Å
Poliovirus (Type3, Sabin Strain)/R77975 Complex (1vbc) Picornaviridae pT3---1 J77
1 MYR
2.80 Å
Poliovirus (Type 1, Mahoney Strain)/R78206 Complex (1vbd) Picornaviridae pT3---1 J78
1 MYR
2.90 Å
Poliovirus (Type 3, Sabin Strain) Mutant F124L, F134L/R78206 Complex (1vbe) Picornaviridae pT3---1 J78
1 MYR
2.80 Å
Human Rhinovirus/SDZ 880-061 Complex (1vrh) Picornaviridae pT3---1 SD8
3.00 Å
Bacteriophage MS2/19 nt. MS2 RNA Fragment (1zdh) Leviviridae 32 (RNA)
167
--2.70 Å
Bacteriophage MS2/19 nt. MS2 RNA Fragment (1zdi) Leviviridae 32 (RNA)
139
--2.70 Å
Bacteriophage MS2/8 nt. MS2 RNA Fragment (1zdj) Leviviridae 32 (RNA)
170
--2.90 Å
Bacteriophage MS2/23 nt. MS2 RNA Fragment (1zdk) Leviviridae 32 (RNA)
155
--2.86 Å
Black Beetle Virus (BBV) (2bbv) Nodaviridae 31 (RNA)
208
5 Ca2+
-2.80 Å
Bacteriophage Φ-X 174 (2bpa) Microviridae 11 (DNA)
178
--3.00 Å
Canine Parvovirus (2cas) Parvoviridae 1-87
--3.00 Å
Human Rhinovirus 14 Mutant I2170V/Win65291 Complex (2hwb) Picornaviridae pT3---1 W91
3.00 Å
Human Rhinovirus 14 Mutant I2170V/Win54954 Complex (2hwc) Picornaviridae pT3---1 W54
3.00 Å
Human Rhinovirus 1A/Win56291 Complex (2hwd)