Feedback Form
{pdb_id}

Oligomer Generator

Click here for Detailed Instructions

(1) Pick a capsid from VIPERdb:

-OR- upload your own PDB
(WARNING: coordinates must be in the VIPERdb convention)
T-number (for upload only):

(2) Would you like to generate a section of the particle?

(If you have chosen to generate a section of the particle skip step 3)


(3) Select the SUBUNIT and MATRIX identifiers


Select a chain ID from the pulldown, and enter a series of comma delimited matrix identifiers (1, 4, 3, etc.) or a range of matrix identifiers (1-60).
 

OR enter a set of specific chain-matrix values. (based on the numbers in the adjacent DIAGRAM e.g. C1,B6,C7,B8,C9,B5 OR simply 1, 2, 3, etc.)
 

(4) Use only the C-alpha atoms?

Yes No

(5) Is this an oligomer for Modeller?

Yes No





Vijay Reddy


Main | Data & Analysis | Utilities | Search | Contact Us | Help | Links | Mailing List | Cite VIPERdb | Disclaimer

©1998-2016. TSRI. All rights Reserved.