Submit Coordinates for VIPERdb Analysis

Note: Submitted coordinates are kept private until the publication is released or until a given time requested by the author.

  • Enter your e-mail address *

  • Enter the CAPSID name  

  • Enter the Viral Genome (e.g., ssRNA, dsDNA etc.,)  

  • Enter the CAPSID Family *  

  • Enter the CAPSID Genus *  

  • Enter the CAPSID Resolution  

  • Upload your PDB file of choice *

  • Are the coordinates in VIPERdb convention *
  • Yes
    Don't Know

  • **Absolutely necessary**: If the coordinates are not in the VIPER convention, please upload the transformations necessary to create a complete capsid, UNLESS they are already included in the uploaded PDB file as BIOMT matrices

  • Select the T number of your virus/capsid *

  • Choose whether you want the standard analysis or raw data
  • A webpage similar to those for VIPER entries is generated, complete with images and plots. Not automated, results returned in around 24 hours.
    Results are automatically generated, and the raw data is made available to download via an email. Results returned in around an hour.

    Any Questions/Problems contact  Vijay Reddy

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